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1.
Arch Razi Inst ; 78(3): 989-995, 2023 06.
Artigo em Inglês | MEDLINE | ID: mdl-38028855

RESUMO

Gastric cancer (GC) is one of the deadliest tumors due to its competence to invade and metastasize. The DNA repair gene (XRCC1), interleukin-8 (IL-8) gene, and B-cell lymphoma 2 (Bcl-2) gene play a crucial role in the development and progression of GC. This study aimed to evaluate the expression of these target genes in GC patients in the Kurdistan region of Iraq. Gastric cancer tissues were collected from 29 patients diagnosed with gastric adenocarcinoma that underwent gastric resection, and 21 tissue samples were obtained from healthy patients that underwent gastroscopy. The gastric tissues were collected in different hospitals in Erbil and Sulaymaniyah cities in the Kurdistan region of Iraq. Moreover, the data regarding Helicobacter pylori, age, gender, and stage of the disease were recorded and analyzed using GraphPad Prism. The gene expression levels of XRCC1, IL-8, and Bcl-2 from gastric tissue were studied by real-time quantitative polymerase chain reaction. The results showed that H. pylori infection was equally distributed among males and females in the tissues of gastric patients, while most of the H. pylori-negative patients were females. It is also found that gastric patients aged 30-60 years old are more commonly tested for the H. pylori test. Accordingly, in this study, patients diagnosed with gastric inflammation more often tested positive for H. pylori, while patients diagnosed with gastric cancer tested negative for this infection. Additionally, it was found that the target genes (XRCC1, IL-8, and Bcl-2) were significantly upregulated in GC patients, compared to the healthy group. Finally, the result revealed that XRCC1, IL-8, and Bcl-2 were upregulated in the Kurdish patients with GC, compared to the healthy control group. Targeting XRCC1, IL-8, and Bcl-2 genes can be an interesting field and promising strategy for cancer treatment.


Assuntos
Adenocarcinoma , Interleucina-8 , Proteínas Proto-Oncogênicas c-bcl-2 , Neoplasias Gástricas , Proteína 1 Complementadora Cruzada de Reparo de Raio-X , Adulto , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Adenocarcinoma/genética , Reparo do DNA , Interleucina-8/genética , Neoplasias Gástricas/genética , Neoplasias Gástricas/metabolismo , Neoplasias Gástricas/patologia , Regulação para Cima , Proteína 1 Complementadora Cruzada de Reparo de Raio-X/genética , Proteínas Proto-Oncogênicas c-bcl-2/genética
2.
Microbiol Spectr ; 10(2): e0256421, 2022 04 27.
Artigo em Inglês | MEDLINE | ID: mdl-35234489

RESUMO

Next-generation sequencing (NGS) is a powerful tool for detecting and investigating viral pathogens; however, analysis and management of the enormous amounts of data generated from these technologies remains a challenge. Here, we present VPipe (the Viral NGS Analysis Pipeline and Data Management System), an automated bioinformatics pipeline optimized for whole-genome assembly of viral sequences and identification of diverse species. VPipe automates the data quality control, assembly, and contig identification steps typically performed when analyzing NGS data. Users access the pipeline through a secure web-based portal, which provides an easy-to-use interface with advanced search capabilities for reviewing results. In addition, VPipe provides a centralized system for storing and analyzing NGS data, eliminating common bottlenecks in bioinformatics analyses for public health laboratories with limited on-site computational infrastructure. The performance of VPipe was validated through the analysis of publicly available NGS data sets for viral pathogens, generating high-quality assemblies for 12 data sets. VPipe also generated assemblies with greater contiguity than similar pipelines for 41 human respiratory syncytial virus isolates and 23 SARS-CoV-2 specimens. IMPORTANCE Computational infrastructure and bioinformatics analysis are bottlenecks in the application of NGS to viral pathogens. As of September 2021, VPipe has been used by the U.S. Centers for Disease Control and Prevention (CDC) and 12 state public health laboratories to characterize >17,500 and 1,500 clinical specimens and isolates, respectively. VPipe automates genome assembly for a wide range of viruses, including high-consequence pathogens such as SARS-CoV-2. Such automated functionality expedites public health responses to viral outbreaks and pathogen surveillance.


Assuntos
COVID-19 , Vírus , Biologia Computacional/métodos , Sequenciamento de Nucleotídeos em Larga Escala/métodos , Humanos , SARS-CoV-2/genética , Vírus/genética
3.
Metallomics ; 12(6): 916-934, 2020 06 24.
Artigo em Inglês | MEDLINE | ID: mdl-32352129

RESUMO

Metallic implant biomaterials predominate in orthopaedic surgery. Compared to titanium-based permanent implants, magnesium-based ones offer new possibilities as they possess mechanical properties closer to the ones of bones and they are biodegradable. Furthermore, magnesium is more and more considered to be "bioactive" i.e., able to elicit a specific tissue response or to strengthen the intimate contact between the implant and the osseous tissue. Indeed, several studies demonstrated the overall beneficial effect of magnesium-based materials on bone tissue (in vivo and in vitro). Here, the direct effects of titanium and magnesium on osteoblasts were measured on proteomes levels in order to highlight metal-specific and relevant proteins. Out of 2100 identified proteins, only 10 and 81 differentially regulated proteins, compare to the control, were isolated for titanium and magnesium samples, respectively. Selected ones according to their relationship to bone tissue were further discussed. Most of them were involved in extracellular matrix maturation and remodelling (two having a negative effect on mineralisation). A fine-tuned balanced between osteoblast maturation, differentiation and viability was observed.


Assuntos
Magnésio/metabolismo , Osteoblastos/metabolismo , Titânio/metabolismo , Materiais Biocompatíveis/química , Sobrevivência Celular/efeitos dos fármacos , Humanos , Imunofenotipagem , Proteoma/metabolismo , Proteômica , Propriedades de Superfície , Espectrometria de Massas em Tandem
4.
Int J Tuberc Lung Dis ; 21(3): 303-308, 2017 03 01.
Artigo em Inglês | MEDLINE | ID: mdl-28225340

RESUMO

BACKGROUND: Drug resistance in general, and multidrug-resistant tuberculosis (MDR-TB) in particular, threatens global tuberculosis (TB) control efforts. Population-based estimates of drug resistance are needed to develop strategies for controlling drug-resistant TB in Pakistan. OBJECTIVE: To obtain population-based data on Mycobacterium tuberculosis drug resistance in Pakistan. METHODS: To obtain drug resistance data, we conducted a population-based study of TB cases in all provinces of Pakistan. We performed culture and drug susceptibility testing on M. tuberculosis isolates from patients with a prior history of anti-tuberculosis treatment (retreatment cases) from all over the country. RESULTS: Of 544 isolates from previously treated cases, 289 (53.1%) were susceptible to all first-line drugs, 255 (46.9%) were resistant to at least one anti-tuberculosis drug and 132 (24.3%) were MDR-TB. Among MDR-TB isolates, 47.0% were ofloxacin (OFX) resistant. Extensively drug-resistant TB was found in two (0.4%) isolates. CONCLUSION: Prevalence of drug resistance in retreatment isolates was high. The alarmingly high prevalence of OFX resistance among MDR-TB isolates may threaten the success of efforts to control and treat MDR-TB.


Assuntos
Antituberculosos/farmacologia , Tuberculose Extensivamente Resistente a Medicamentos/tratamento farmacológico , Mycobacterium tuberculosis/efeitos dos fármacos , Tuberculose Pulmonar/tratamento farmacológico , Adolescente , Adulto , Antituberculosos/administração & dosagem , Estudos Transversais , Tuberculose Extensivamente Resistente a Medicamentos/epidemiologia , Tuberculose Extensivamente Resistente a Medicamentos/microbiologia , Feminino , Humanos , Masculino , Testes de Sensibilidade Microbiana , Mycobacterium tuberculosis/isolamento & purificação , Ofloxacino/farmacologia , Paquistão/epidemiologia , Prevalência , Retratamento , Tuberculose Resistente a Múltiplos Medicamentos/tratamento farmacológico , Tuberculose Resistente a Múltiplos Medicamentos/epidemiologia , Tuberculose Resistente a Múltiplos Medicamentos/microbiologia , Tuberculose Pulmonar/epidemiologia , Tuberculose Pulmonar/microbiologia , Adulto Jovem
5.
Clin Exp Immunol ; 185(2): 239-51, 2016 08.
Artigo em Inglês | MEDLINE | ID: mdl-26940026

RESUMO

Cytomegalovirus (CMV) infection markedly expands NKG2C+/NKG2A- NK cells, which are potent killers of infected cells expressing human leucocyte antigen (HLA)-E. As HLA-E is also over-expressed in several haematological malignancies and CMV has been linked to a reduced risk of leukaemic relapse, we determined the impact of latent CMV infection on NK cell cytotoxicity against four tumour target cell lines with varying levels of HLA-E expression. NK cell cytotoxicity against K562 (leukaemia origin) and U266 (multiple myeloma origin) target cells was strikingly greater in healthy CMV-seropositive donors than seronegative donors and was associated strongly with target cell HLA-E and NK cell NKG2C expression. NK cell cytotoxicity against HLA-E transfected lymphoma target cells (221.AEH) was ∼threefold higher with CMV, while NK cell cytotoxicity against non-transfected 721.221 cells was identical between the CMV groups. NK cell degranulation (CD107a(+) ) and interferon (IFN)-γ production to 221.AEH cells was localized almost exclusively to the NKG2C subset, and antibody blocking of NKG2C completely eliminated the effect of CMV on NK cell cytotoxicity against 221.AEH cells. Moreover, 221.AEH feeder cells and interleukin (IL)-15 were found to expand NKG2C(+) /NKG2A(-) NK cells preferentially from CMV-seronegative donors and increase NK cell cytotoxicity against HLA-E(+) tumour cell lines. We conclude that latent CMV infection enhances NK cell cytotoxicity through accumulation of NKG2C(+) NK cells, which may be beneficial in preventing the initiation and progression of haematological malignancies characterized by high HLA-E expression.


Assuntos
Infecções por Citomegalovirus/imunologia , Citomegalovirus/imunologia , Citotoxicidade Imunológica , Células Matadoras Naturais/imunologia , Subfamília C de Receptores Semelhantes a Lectina de Células NK/análise , Latência Viral , Adolescente , Adulto , Antígenos CD57/imunologia , Linhagem Celular Tumoral , Testes Imunológicos de Citotoxicidade , Feminino , Voluntários Saudáveis , Antígenos de Histocompatibilidade Classe I/imunologia , Humanos , Células K562 , Ativação Linfocitária , Linfoma/imunologia , Masculino , Pessoa de Meia-Idade , Mieloma Múltiplo/imunologia , Subfamília C de Receptores Semelhantes a Lectina de Células NK/imunologia , Adulto Jovem , Antígenos HLA-E
6.
Commun Agric Appl Biol Sci ; 76(4): 671-89, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-22702187

RESUMO

During an excursion in the Landschaftspark Duisburg-Nord in 2009 and 2010 we were able to collect and identify more than 100 specimens of microfungi on different parts of cultivated and wild plant species. We found parasitic and saprophytic microfungi on trees, bushes and herbaceous plants. Some of them have been observed only rarely until now. Most of the collected microfungi species belong to the classes of Ascomycetes, Basidiomycetes and Deuteromycetes - for example Leptosphaeria modesta (Desm.) Rabenh. on Knautia cf. arvensis (L.) Coult., Ramularia urticae Ces. on Urtica dioica L., Stigmina glomerulosa (Sacc.) S. Hughes on Juniperus communis L., Pseudomassaria corni (Sowerby) Arx on Cornus alba L., Mollisia discolor (Mont.) W. Phillips on Cornus alba L., Botryosphaeria quercuum (Schwein.) Sacc. on Quercus robur L., Peronospora cytisi Rostr. on Laburnum anagyroides Med., Microsphaera guarinonii Briosi and Cavara on Laburnum anagyroides Med., Brachysporium dingleyae S. Hughes on Fraxinus angustifolia Vahl and Rhododendron spec., Mamiania fimbriata (Pers.) Ces. and De Not. on Carpinus betulus L., Atopospora betulina (Fr.) Petr. on Betula pendula Roth, Septoria robiniae (Lib.) Desm. (=Phloeospora robiniae (Lib.) Höhn.) on Robinia pseudoacacia L., Chalara hughesii Nag Raj and W.B. Kendr. on Quercus robur L.. All specimens are located in the Herbarium ESS, Mycotheca Parva collection G.B. Feige and N. Ale-Agha.


Assuntos
Microbiologia do Ar , Monitoramento Ambiental , Fungos/classificação , Fungos/isolamento & purificação , Plantas/microbiologia , Alemanha
7.
Commun Agric Appl Biol Sci ; 75(4): 675-97, 2010.
Artigo em Inglês | MEDLINE | ID: mdl-21534478

RESUMO

In June 2009 we organized a botanical student excursion to the eastern part of Sardinia, Italy. On this occasion we were able to collect and identify over 80 species of microfungi growing on higher plants. The collecting sites were spread over a large area, among them were La Caletta, Capo Comino, Monte Albo, Cala Gonone, Monte Maccione, San Teodoro, Capo Testa. The collected microfungi were parasitic or saprophytic; Basidiomycotina (Uredinales), Ascomycotina and Deuteromycotina (Hyphomycetes, Coelomycetes) were predominant. Examples are Pezicula corticola (Jörg.) NANNF. (new for Sardinia), on Pyrus communis. Puccinia chamaecyparissi TROTT. (new for Sardinia), on Santolina insularis. Sphaceloma oleae CICC. and GRANITI (new for Sardinia) and Phlyctema vagabunda DESM. (new for Sardinia), on Olea europaea and Arbutus unedo. Puccinia pseudosphaeria MONT. (new for Sardinia), on Sonchus oleraceus. Discula umbrinella (BERK. and BR.) SUTTON (new for Sardinia)(D. quercina WEST. and BARK), on Quercus coccifera. Zaghouania phillyreae PAT. (new for Sardinia), on Phillyrea angustifolia. Phymatotrichum omnivorum (DUGGAR) HENNEBERT, new on Verbascum thapsus for Sardinia. Guignardia punctoidea (COOKE) SCHROTER (new for Sardinia), on Quercus ilex. Many of the collected species are rare or unknown for the area of investigation until now. All specimens are located in the Herbarium ESS, Mycotheca Parva collection G.B. Feige and N. Ale-Agha.


Assuntos
Fungos/isolamento & purificação , Doenças das Plantas/microbiologia , Plantas/microbiologia , Fungos/classificação , Fungos/genética , Fungos/crescimento & desenvolvimento , Itália , Esporos Fúngicos/classificação , Esporos Fúngicos/genética , Esporos Fúngicos/crescimento & desenvolvimento , Esporos Fúngicos/isolamento & purificação
8.
Commun Agric Appl Biol Sci ; 73(2): 135-45, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-19226751

RESUMO

During an excursion to the Alps near the German/Austrian border (Kleinwalsertal) in August 2007, we were able to collect more than 40 species of microfungi as parasites or saprophytes on different parts of wild plants. Some of them have been observed only rarely until now. Most of the species collected belong to the classes Ascomycotina, Basidiomycotina, and Deuteromycotina. For example: -Leptosphaeria jaceae Holm on Centaurea jacea L.; -Mycosphaerella equiseticola Bond.-Mont. on Equisetum telmateia Ehrh.; -Erysiphe cichoracearum DC. on Adenostyles alliariae (Gouan) Kerner, Centaurea phrygia, Cicerbita alpina (L.) Wallr.; -Podosphaera fusca (Fr.) U. Braun comb. nov. on Petasites paradoxus (Retz.) Baumg. and Senecio alpinus (L.) Scop.; -Pirottaea veneta Sacc. and Speg. on Lamium maculatum L.; -Coleosporium tussilaginis (Pers.) Kleb. on Adenostyles alliariae, Petasites paradoxus; -Puccinia mulgedii (West.) Syd. on Cicerbita alpinl; -Titleospora equiseti (Desm.) Vassil., -Stagonospora equiseti Fautr. on Equisetum telmateia, -Valdensia heterodoxa Peyronel on Cicerbita alpina.


Assuntos
Fungos/classificação , Fungos/isolamento & purificação , Filogenia , Doenças das Plantas/microbiologia , Áustria
9.
Commun Agric Appl Biol Sci ; 73(2): 147-55, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-19226752

RESUMO

Microfungi were collected in southern Mexico in the vicinity of Puerto Escondido, Oaxaca in 2007. In 2006, samples were gathered from Acacia myrmecophytes [(Remarkable microfungi from Oaxaca of Acacia species) Part I]. In the present investigation [Part II], we collected microfungi from different parts of a variety of wild and cultivated higher plants belonging to the families Anacardiaceae, Caricaceae, Fabaceae, Moraceae, and Nyctaginacae. The microfungi found here live as parasites or saprophytes. Interestingly, the species Colletotrichum lindemuthianum (Sacc. and Magn.) Briosi and Cavara has repeatedly been used to cause fungal infections of Phaseolus lunatus leaves in laboratory experiments. We could now find the same fungus as parasite on the same host plants under field conditions showing that results obtained in the laboratory are also relevant in nature. Most of the fungal species collected belong to the classes Ascomycotina, Basidiomycotina and Deuteromycotina. Until now, some of the microfungi identified in this study have been rarely observed before or have been reported for the first time in Mexico, for example: Pestalotia acaciae Thüm. on Acacia collinsii Safford; Corynespora cassiicola (Berk. and M.A. Curtis) C.T. Wei on Carica papaya L.; Botryosphaeria ribis Grossenb. and Duggar and Cercosporella leucaenae (Raghu Ram and Mallaiah) U. Braun (new for Mexico) and Camptomeris leucaenae (F. Stevens and Dalbey) Syd. (new for Mexico) on Leucaena leucocephala (Lam.) de Wit.; Oidium clitoriae Narayanas. and K. Ramakr. and Phakopsora cf. pachyrhizi Sydow and Sydow (new for Mexico) on Clitoria ternatea L.; Botryosphaeria obtusa (Schw.) Shoemaker on Prosopis juliflora (Sw.) DC.; Cylindrocladium scoparium Morg. on Ficus benjamina L.; Acremonium sp. on Bougainvillea sp. All specimens are located in the herbarium ESS. Mycotheca Parva collection G.B. Feige and N. Ale-Agha.


Assuntos
Fungos/classificação , Fungos/isolamento & purificação , Filogenia , Doenças das Plantas/microbiologia , Fungos/patogenicidade , México , Plantas/microbiologia
10.
Commun Agric Appl Biol Sci ; 72(4): 849-56, 2007.
Artigo em Inglês | MEDLINE | ID: mdl-18396820

RESUMO

During our investigation on microfungi in Antoniusheim, Fleissenbach und Merfelderbruch near Dülmen in Münsterland in the years 2005 and 2006 we were able to collect and identify 25 microfungi on Alnus glutinosa (L.) GAERTN. Among them are some which are very rare in Germany linke Phragmoporthe conformis (Berkley & Broome) Petrak, Cryptosporiopsis alnea (Rostr.) Petr., Prosthecium auctum (Berk. & Broome) Petr., Taphrina alni-incanae (Kun.) Magn. [= T. Amentorum (Sadeback) Rostrup], Cryptodiaporthe oxystoma (Rehm.) Z. Urb., Cladosporium alnicola Bub. & Vleug. [= C. Herbarum (Pers.)], Erysiphe penicillata (Wallr.) Link, Melampsoridium betulinum Kleb., Bacterodesmium longisporum M.B. Ellis, Marssonina alni Karak. Asteroma alneum (Pers.: Fr.) Sutton . All collected species can be found in the text.


Assuntos
Alnus/microbiologia , Fungos/classificação , Fungos/isolamento & purificação , Filogenia , Doenças das Plantas/microbiologia , Contagem de Colônia Microbiana , Alemanha , Especificidade da Espécie
11.
Commun Agric Appl Biol Sci ; 72(4): 857-66, 2007.
Artigo em Inglês | MEDLINE | ID: mdl-18396821

RESUMO

In the state of Oaxaca (Mexico, 10 km north-west of Puerto Escondido 15 degrees 55' N, 97 degrees 09' W) we were able to collect some microfungi living as parasites or saprophytes on Acacia species, some of them are causing attention for Oaxaca. Many belong to the Deuteromycotina (Hyphomycetes, Coelomycetes) and Ascomycotina. On A. hindsii: Calonectria pseudopeziza (Desm.) Sacc., Hypoxylon truncatum (Schwein. Fr.) J.H. Miller, Epicoccum nigrum Link., Zygosporium gibbum (Sacc., M. Roussau & E. Bommer) S.J. Hughes and on A. cornigera: Phyllosticta acaciicola P. Henn., Taeniolella alta (Ehrenb. ex Pers.) S.J. Hughes, Cephaliophora tropica Thaxt., Diplodia mutila (Fr. Fr.) Mont., Pleospora herbarum (Pers. Fr.) Rabenh., Gliocladium roseum Bainier, Ulocladium atrum Preuss., and different others. All species collected are listed in text.


Assuntos
Acacia/microbiologia , Fungos/classificação , Fungos/crescimento & desenvolvimento , Filogenia , Doenças das Plantas/microbiologia , Contagem de Colônia Microbiana , México , Especificidade da Espécie
12.
J Am Med Inform Assoc ; 13(3): 353-5, 2006.
Artigo em Inglês | MEDLINE | ID: mdl-16501183

RESUMO

The authors describe a pilot project to standardize local laboratory data at five Indian Health Service (IHS) medical facilities by mapping laboratory test names to Logical Observation Identifier Names and Codes (LOINC). An automated mapping tool was developed to assign LOINC codes. At these sites, they were able to map from 63% to 76% of the local active laboratory tests to LOINC using the mapping tool. Eleven percent to 27% of the tests were mapped manually. They could not assign LOINC codes to 6% to 19% of the laboratory tests due to incomplete or incorrect information about these tests. The results achieved approximate other similar efforts. Mapping of laboratory test names to LOINC codes will allow IHS to aggregate laboratory data more easily for disease surveillance and clinical and administrative reporting efforts. This project may provide a model for standardization efforts in other health systems.


Assuntos
Técnicas de Laboratório Clínico/classificação , Logical Observation Identifiers Names and Codes , Técnicas de Laboratório Clínico/normas , Laboratórios , Projetos Piloto , Estados Unidos , United States Indian Health Service
13.
AMIA Annu Symp Proc ; : 899, 2005.
Artigo em Inglês | MEDLINE | ID: mdl-16779186

RESUMO

The Centers for Disease Control and Prevention (CDC) is looking for improved ways to collect complex, and highly sensitive, public health surveillance data. The Sexually Transmitted Diseases - Laboratory Test Methods Survey (STD-LMS) was developed to replace the traditional STD mail survey. The web-based STD-LMS offered distinct advantages over the traditional mail survey technique including,reduced time and cost of conducting the survey and avoiding the often error prone and tedious task of data entry.


Assuntos
Internet , Vigilância da População/métodos , Infecções Sexualmente Transmissíveis , Coleta de Dados/métodos , Humanos , Infecções Sexualmente Transmissíveis/diagnóstico , Infecções Sexualmente Transmissíveis/epidemiologia , Estados Unidos , Interface Usuário-Computador
14.
Commun Agric Appl Biol Sci ; 70(3): 257-67, 2005.
Artigo em Inglês | MEDLINE | ID: mdl-16637187

RESUMO

In the years 2003 and 2004 we have observed an about 70 hectare large area in the Düsseltal, the eastern part of the Neandertal in North Rhine-Westphalia. There we collected on trees, bushes and herbs and found about 150 microfungi of which some are new for Germany or the entire world. E.g.: Pseudocercospora populigena N. ALE-AGHA, U. BRAUN & G.B. FEIGE on Populus berolinensis; Vialaea insculpta (FR.) SACC. on Ilex aquifolium L.; Passalora amelopsidis (PECK.) U. BRAUN on Parthenocissus quinquefolia (L.) PLANCH.: Pleiochaeta setosa (KIRCHN.) HUGHES on Genista angelica L.; Cercospora mercurialis PASS. on Mercurialis perennis L. (new for NRW); Pleurocytospora vestita PETRAK on Ribes aureum PURSH.; Gonatobotrys simplex CORDA on Lolium perenne L.; Phomatospora berckleyi SACC. on Dactylis glomerata L. and so on. All specimens are located in the Herbarium ESS, Mycotheca Parva collection G.B. Feige & N. Ale-Agha.


Assuntos
Fungos/classificação , Fungos/isolamento & purificação , Doenças das Plantas/microbiologia , Plantas/microbiologia , Fungos/patogenicidade , Alemanha , Filogenia
15.
Commun Agric Appl Biol Sci ; 70(3): 269-80, 2005.
Artigo em Inglês | MEDLINE | ID: mdl-16637188

RESUMO

During an excursion to the Slovakian Republic (lower and upper Tatra) of the Botanical Institute of the University of Essen in 2004 we were able to collect about 150 species of microfungi as parasites or saprophytes on cultivated crops and wild plants. Some of them are new for the entire world and a few of them are new for the Slovakian Republic, e.g: Ramularia liliicola N. Ale-Agha, U. Braun & G.B. Feige on Lilium martagon L.; Septoria aegopodii DESM. Ex Kickx. F. on Aegopodium podagaria L.; Puccinia asarina Kunze on Asarum europaeum L.; Puccinia polygoni ALB. & SCHW. and Puccinia polygoni-amphibii PERS. on Bilderdykia convolvulus (L.) Du Mont.; Ramularia chamaenerii Rostr. and Mycosphaerella chamaenerii Saville on Epilobium angustifolium L.; Plasmopara pusilla (de By.) Schroet on Geranium sylvaticum L.; Cercosporidium depressum (Berk. & Br.) Deighta on Angelica sylvestris L. All specimens are located in the Herbarium ESS, Mycotheca Parva collection G.B. Feige & N. Ale-Agha.


Assuntos
Fungos/classificação , Fungos/isolamento & purificação , Doenças das Plantas/microbiologia , Plantas/microbiologia , Fungos/patogenicidade , Filogenia , Eslováquia
16.
Commun Agric Appl Biol Sci ; 69(4): 457-65, 2004.
Artigo em Inglês | MEDLINE | ID: mdl-15756826

RESUMO

During our observations in the SE part of the Carnic Alps in the year 2003 we were able to collect and identify 35 ascomycetes on trees and dead wood. Among these one can find numerous ascomycetes of different orders e.g. Pyrenomycetes, Loculoascomycetes and Discomycetes. Some species like Botryosphaeria ribis GROSENLUCHER & DUGGAR on Ribes alpinum L., Dothiora pyrenophora (FR.) FR. on Sorbus aucuparia L., Gemmamyces piceae (BORTH.) CASAGO. on Picea excelsa (LAM.) LINK, Glomerella montana (SACC.) v. ARX & E. MULLER on Sesleria caerulea (L.) ARD, Hymenoscyphus immutabilis (Fuck.) Dennis on Alnus incana (L.) Moench, Hysterographium fraxini (PERS. Ex. FR.) de Not. on Fraxinus ornus L., Lachnellula willkommii (Hartig) DENNIS [= Trichascyphella willkommii (Hartig) NANNF.] on Larix decidua MILL.,Leptosphaeria lycopodina (Mont.) SACC. on Lycopodium annotinum L., Mollisia adenostylidis REHM. on Adenostyles glabra (MILL.) DC., Pezicula cinnamomea (DC.)SACC. [ana: Cryptosporiopsis quercina PETRAK] on Quercus robur L., Pyrenopeziza petiolaris (A. & S. Ex FR.) NANNF. on Acer pseudoplatanus L., Tapesia rosae (PERS.) FUCKEL on Rosa canina L., are new for this area. All specimen are deposited in the Herbarium ESS Mycotheca Parva, Collection G.B. Feige/N. Ale-Agha.


Assuntos
Ascomicetos/isolamento & purificação , Árvores/microbiologia , Altitude , Ascomicetos/classificação , Ascomicetos/patogenicidade , Itália , Doenças das Plantas/microbiologia , Folhas de Planta/microbiologia , Caules de Planta/microbiologia , Madeira
17.
Commun Agric Appl Biol Sci ; 69(4): 467-77, 2004.
Artigo em Inglês | MEDLINE | ID: mdl-15756827

RESUMO

In addition to the collection of Ascomycotina in the Carnic Alps (see New, rare or remarkable microfungi in the Italian Alps (Carnic Alps) part I ) we were able to treasure about 300 species of parasitic and saprophytic microfungi. Among them Basidiomycetes, Ascomycetes and Deuteromycets like Bostrichonema polygoni (UNGER) SCHROT. on Polygonum viviparum L., Chrysomyxa rhododendri DE BY on Picea abies (L.) KARSTEN, Coleosporium tussilaginis (PERS.) BERK. I=C. cacaliae OTTH.] on Adenostyles glabra (MILL.) DC., Dasyscyphus barbatus (KUNZE) MASSEE on Lonicera nigra L., Leptosphaeria coniothyrium (FUCKEL) SACC. on Rosa canina L., Leptotrochila brunellae (LIND) DENNIS on Prunella grandiflora (L.) SCHOLLER., Marssonina kriegeriana (BES.) MAGNUS on Salix reticulata L., Puccinia alpina FUCKEL on Viola biflora L., Puccinia maculosa (STRAUSS.) ROHLING and Erysiphe cichoracearum DC. On Prenanthes purpurea L., Septoria microsora SPENG. on Gentianella germanica (WILLD.) BORNER, Urocystis orobranches (FR.) FISCH. V. WALDH. on Orobranche gracilis SM., Urocystis violae (J. SOWERBY) A. FISCHER VON WALDHEIN on Viola biflora L. and Uromyces phyteumatum (DC.) UNG. on Phyteuma spicatum L. were dominant. All samples are located in the Herbarium ESS Mycotheca Parva, Collection G.B. Feige/N. Ale-Agha.


Assuntos
Fungos/classificação , Fungos/isolamento & purificação , Plantas/microbiologia , Altitude , Ascomicetos/classificação , Ascomicetos/isolamento & purificação , Basidiomycota/isolamento & purificação , Clima , Geografia , Itália , Doenças das Plantas/microbiologia
18.
Commun Agric Appl Biol Sci ; 69(4): 479-87, 2004.
Artigo em Inglês | MEDLINE | ID: mdl-15756828

RESUMO

During our investigations on microfungi in the Ruhr area we were able to find the remarkable mycodiversity of different genera and species on dead stems of Heracleum mantegazzianum, a Neophyt for the European flora. Altemaria alternata (FR.FR.) KEISSL., Camarosporium spec., Cladosporium herbarum (PERS.) LINK, Colletotrichum dematium (PERS. Ex FR.) GOVE, Dactylella armandii YADV., Dasyscyphus mollissimus (LASCH.) DENNIS, Dendryphion comosum WALLR., Endophragmia hyalosperma (CORDA) MORGAN-JONES & COLE, Epicoccum purpurescens EHRENB., Gliomastix luzulae (FUCKEL) MASON, Hymenoscyphus herbarum (PERS.) DENNIS, Lasiosphaeria caudata (FUCKEL) MASON, Lophiostoma caulium (FR.) CES. & de NOT, Periconia byssoides PERS., Phoma complanata (TODE EX FR.) DESM., Phoma longissima (PERS.) WESLEND., Pirottaea cf. nigrostriata GRADDON, Pleospora herbarum (PERS.) RABENH. EX. CES. & de NOT, Pleurophragmium parvisporum (PREUSS) HOLUBOVA-JECHOVA, Pyrenopeziza chailletii FUCKEL, Rhizopus stolonifer (EHRENB. FR.) VUILL, Sclerotina sclerotiorum (LIB.) DE BY., Septofusidium herbarum (BROWN & SMITH) SAMSON, Torula herbarum (PERS.) LINK, Trichoderma koningii OUDEM, Volutella melaloma BERK. & BR. The sample is located in the Herbarium ESS Mycotheca Parva, Collection G.B. Feige/N. Ale-Agha.


Assuntos
Heracleum/microbiologia , Caules de Planta/microbiologia , Alternaria/isolamento & purificação , Alternaria/patogenicidade , Cladosporium/isolamento & purificação , Cladosporium/patogenicidade , Colletotrichum/isolamento & purificação , Colletotrichum/patogenicidade , Fungos/isolamento & purificação , Fungos/patogenicidade , Doenças das Plantas/microbiologia
19.
Commun Agric Appl Biol Sci ; 69(4): 489-97, 2004.
Artigo em Inglês | MEDLINE | ID: mdl-15756829

RESUMO

During our investigation on microfungi in North Rhine Westphalia in the years 2002 and 2003 we were able to collect and identify some new and rare species of microfungi as parasites and saprophytes on wild and ornamental plants. Some of these like Erysiphe elevata (BURILL.) U. BRAUN & S. TAKAMATSU COMB. NOV. [=Microsphaera elevata BURILL.] on Catalpa bignonioides WALT., Erysiphe syringae-japonicae (U. BRAUN) U. BRAUN & S. TAKAMATSU [= Microsphaera syringae-japonicae U. BRAUN, M. aceris BUNKINA. KOMAROVSKIE CHTENIYA, Erysiphe acerina U. BRAUN & S. TAKAMATSU] on Acer campestre L. and Acer barinerve L., Mycosphaerella iridis (DESM.) SCHROET., Ectostroma iridis FR. and Volutella melaloma BERK. & BR on Iris pseudacorus L., Puccinia doronicella P. SYD. & SYD. on Doronicum columnae TEN., Ascochyta lamiorum SACC. S.L. I=A. phlomidis BUB. & WROB.) on Phlomis tuberosa L., Colletotrichum gloeosporides (PENZ.) SACC. on Passiflora coerulea L., Oidium hortensiae JOERST on Hydrangea macrophylla (THUNB.) SER., Puccinia horiana P. HENN. on Chrysanthemum vulgare (L.) BERNH., Lophodermium pinastri (SCHRAD.) CHEV., Leptostroma pinorum SACC., Sclerophoma pythiophila (CDA) HOHN., Lichenoconium boreale (KARST.) PETRAK. & SYD., Anthostomella formosa KIRSCHST. and Sphaeropsis sapinae (FR.) DYKO & SUTTON on Pinus nigra L. are new for Germany. All samples are located in the Herbarium ESS Mycotheca Parva, Collection G.B. Feige/N. Ale-Agha.


Assuntos
Fungos/isolamento & purificação , Plantas/microbiologia , Clima , Fungos/classificação , Fungos/patogenicidade , Alemanha , Phlomis/microbiologia , Doenças das Plantas/microbiologia , Folhas de Planta/microbiologia
20.
Food Chem Toxicol ; 41(10): 1399-407, 2003 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-12909274

RESUMO

Carotenoids as well as their metabolites and oxidation products stimulate gap junctional communication (GJC) between cells, which is thought to be one of the protective mechanisms related to cancer-preventive activities of these compounds. Increased intake of lycopene by consumption of tomatoes or tomato products has been epidemiologically associated with a diminished risk of prostate cancer. Here, we report a stimulatory effect of a lycopene oxidation product on GJC in rat liver epithelial WB-F344 cells. The active compound was obtained by complete in vitro oxidation of lycopene with hydrogen peroxide/osmium tetroxide. For structural analysis high performance liquid chromatography, gas chromatography coupled with mass spectrometry, ultraviolet/visible-, and infrared spectrophotometry were applied. The biologically active oxidation product was identified as 2,7,11-trimethyl-tetradecahexaene-1,14-dial. The present data indicate a potential role of lycopene degradation products in cell signaling enhancing cell-to-cell communication via gap junctions.


Assuntos
Antioxidantes/farmacologia , Carotenoides/farmacologia , Comunicação Celular/efeitos dos fármacos , Junções Comunicantes/efeitos dos fármacos , Animais , Antioxidantes/química , Carotenoides/química , Cromatografia Líquida de Alta Pressão , Diazometano/química , Licopeno , Espectrometria de Massas , Oxirredução , Ratos , Ratos Endogâmicos F344 , Espectrometria de Massas por Ionização por Electrospray , Espectrofotometria Infravermelho , Espectrofotometria Ultravioleta
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